Welcome to AuMath-AdvancedR 2019!

This is the front page of a GitHub organization for a course on advanced R programming, run in fall semester 2019 at the maths department of Aarhus university. We were 17 students and one course organizer (Ute Hahn). During the course, student teams developed R packages on various, self chosen topics. Using the pkgdown R package, they also created web pages introducing their packages. Below are links to selected packages.

Packages for evolutionary genetics modelling

• PhaseTypeGenetics Phase type distributions, theory and simulation.
• ticphasetype Core functions from phase-type theory that are useful in the analysis of biological data.
• simDNA Simulating DNA sequences according to different evolutionary models.

Computational statistics packages

• Sampling Permutation tests and bootstrap intervals.
• Permutation1 Permutation tests, with a focus on tests for linear models.